问题描述
我想绘制我映射到病毒基因组的读数的直方图。我不断收到错误消息“但当前最大值设置为 [25000]。要增加此数字,请更改 max_points_per_track 在 etc/housekeeping.conf 中。”即使我已将最大值设置为 50000”
我用 circos -cdump :max 检查了最大值,但最大值不会从 25000 改变。我该如何解决这个错误并绘制每个碱基的映射读取?
感谢您的帮助
####This is my circos.conf file####
karyotype = EBV_Karyotypes.txt
chromosomes_units = 1000000
<<include etc/colors_fonts_patterns.conf>>
<<include etc/housekeeping.conf>>
# IMAGE
<image>
<<include image.conf>>
</image>
# IDEOGRAM
<ideogram>
<spacing>
default = 1u
break = 1u
</spacing>
radius = 0.9r
thickness = 100p
fill = yes
stroke_color = black
stroke_thickness = 10p
show_label = yes
label_radius = 1.05r
label_size = 80p
label_parallel = yes
</ideogram>
# PLOTS
<plots>
type = histogram
color = black
fill_under = yes
thickness = 1
<plot>
file = test.txt
r0 = 0.75r
r1 = 0.98r
min = 0
max = 50000
<rules>
<rule>
condition = 1
fill_color = eval(sprintf("rdbu-7-div-%d",remap_int(var(value),18000,1,7)))
</rule>
</rules>
</plot>
</plots>
解决方法
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