circos 错误:etc/housekeeping.conf 中的 max_points_per_track 不会改变

问题描述

我想绘制我映射到病毒基因组的读数的直方图。我不断收到错误消息“但当前最大值设置为 [25000]。要增加此数字,请更改 max_points_per_track 在 etc/housekeeping.conf 中。”即使我已将最大值设置为 50000”

我用 circos -cdump :max 检查了最大值,但最大值不会从 25000 改变。我该如何解决这个错误并绘制每个碱基的映射读取?

感谢您的帮助

####This is my circos.conf file####

karyotype = EBV_Karyotypes.txt
chromosomes_units = 1000000

<<include etc/colors_fonts_patterns.conf>>
<<include etc/housekeeping.conf>>

# IMAGE
<image>
<<include image.conf>>
</image>

# IDEOGRAM
<ideogram>
<spacing>
default = 1u
break = 1u
</spacing>
radius           = 0.9r
thickness        = 100p
fill             = yes
stroke_color     = black
stroke_thickness = 10p
show_label       = yes
label_radius     = 1.05r
label_size       = 80p
label_parallel   = yes
</ideogram>

# PLOTS
<plots>
type       = histogram
color      = black
fill_under = yes
thickness  = 1
<plot>
file = test.txt
r0   = 0.75r
r1   = 0.98r
min  = 0
max  = 50000
<rules>
<rule>
condition = 1
fill_color = eval(sprintf("rdbu-7-div-%d",remap_int(var(value),18000,1,7)))
</rule>
</rules>
</plot>

</plots>

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