可能由于 wxPython 无法为 DeepLabCut 构建环境

问题描述

我正在遵循本指南:(https://github.com/DeepLabCut/DeepLabCut/blob/master/docs/installation.md) 使用提供的 conda 环境在 Ubuntu 18.04 上安装 DeepLabCut GPU。

我使用的是 python 3.6,命令 conda env create -f DLC-GPU.yaml 不断失败并给出输出

    Running setup.py install for wxpython: started
    Running setup.py install for wxpython: finished with status 'error'

Failed 

完整的输出在这个粘贴箱中:https://pastebin.com/c7AN7dKr

这很神秘,因为我已经安装了 wxpython。根据他们的文档运行安装命令

pip install -U \
>     -f https://extras.wxpython.org/wxPython4/extras/linux/gtk3/ubuntu-18.04 \
>     wxPython

给予

Looking in links: https://extras.wxpython.org/wxPython4/extras/linux/gtk3/ubuntu-18.04
Requirement already satisfied: wxPython in ./anaconda3/lib/python3.8/site-packages (4.1.1)

Requirement already satisfied: six in ./anaconda3/lib/python3.8/site-packages (from wxPython) (1.15.0)
Requirement already satisfied: pillow in ./anaconda3/lib/python3.8/site-packages (from wxPython) (8.2.0)
Requirement already satisfied: numpy in ./anaconda3/lib/python3.8/site-packages (from wxPython) (1.20.1)

如果有人能帮助我让它工作,我将不胜感激!

附加信息:由于初始部分安装失败,我需要在安装命令的末尾添加一个 --force 标志以覆盖现有的 conda env。我认为这不是问题,因为我在没有 --force

的新环境中遇到了同样的错误

包列表:

_ipyw_jlab_nb_ext_conf    0.1.0                    py38_0  
_libgcc_mutex             0.1                        main  
alabaster                 0.7.12             pyhd3eb1b0_0  
anaconda                  2021.05                  py38_0  
anaconda-client           1.7.2                    py38_0  
anaconda-navigator        2.0.3                    py38_0  
anaconda-project          0.9.1              pyhd3eb1b0_1  
anyio                     2.2.0            py38h06a4308_1  
appdirs                   1.4.4                      py_0  
argh                      0.26.2                   py38_0  
argon2-cffi               20.1.0           py38h27cfd23_1  
asn1crypto                1.4.0                      py_0  
astroid                   2.5              py38h06a4308_1  
astropy                   4.2.1            py38h27cfd23_1  
async_generator           1.10               pyhd3eb1b0_0  
atomicwrites              1.4.0                      py_0  
attrs                     20.3.0             pyhd3eb1b0_0  
autopep8                  1.5.6              pyhd3eb1b0_0  
babel                     2.9.0              pyhd3eb1b0_0  
backcall                  0.2.0              pyhd3eb1b0_0  
backports                 1.0                pyhd3eb1b0_2  
backports.functools_lru_cache 1.6.4              pyhd3eb1b0_0  
backports.shutil_get_terminal_size 1.0.0              pyhd3eb1b0_3  
backports.tempfile        1.0                pyhd3eb1b0_1  
backports.weakref         1.0.post1                  py_1  
beautifulsoup4            4.9.3              pyha847dfd_0  
bitarray                  2.1.0            py38h27cfd23_1  
bkcharts                  0.2                      py38_0  
black                     19.10b0                    py_0  
blas                      1.0                         mkl  
bleach                    3.3.0              pyhd3eb1b0_0  
blosc                     1.21.0               h8c45485_0  
bokeh                     2.3.2            py38h06a4308_0  
boto                      2.49.0                   py38_0  
bottleneck                1.3.2            py38heb32a55_1  
brotlipy                  0.7.0           py38h27cfd23_1003  
bzip2                     1.0.8                h7b6447c_0  
c-ares                    1.17.1               h27cfd23_0  
ca-certificates           2021.4.13            h06a4308_1  
cairo                     1.16.0               hf32fb01_1  
certifi                   2020.12.5        py38h06a4308_0  
cffi                      1.14.5           py38h261ae71_0  
chardet                   4.0.0           py38h06a4308_1003  
click                     7.1.2              pyhd3eb1b0_0  
cloudpickle               1.6.0                      py_0  
clyent                    1.2.2                    py38_1  
colorama                  0.4.4              pyhd3eb1b0_0  
conda                     4.10.1           py38h06a4308_1  
conda-build               3.21.4           py38h06a4308_0  
conda-content-trust       0.1.1              pyhd3eb1b0_0  
conda-env                 2.6.0                         1  
conda-package-handling    1.7.3            py38h27cfd23_1  
conda-repo-cli            1.0.4              pyhd3eb1b0_0  
conda-token               0.3.0              pyhd3eb1b0_0  
conda-verify              3.4.2                      py_1  
contextlib2               0.6.0.post1                py_0  
cryptography              3.4.7            py38hd23ed53_0  
curl                      7.71.1               hbc83047_1  
cycler                    0.10.0                   py38_0  
cython                    0.29.23          py38h2531618_0  
cytoolz                   0.11.0           py38h7b6447c_0  
dask                      2021.4.0           pyhd3eb1b0_0  
dask-core                 2021.4.0           pyhd3eb1b0_0  
dbus                      1.13.18              hb2f20db_0  
decorator                 5.0.6              pyhd3eb1b0_0  
defusedxml                0.7.1              pyhd3eb1b0_0  
diff-match-patch          20200713                   py_0  
distributed               2021.4.1         py38h06a4308_0  
docutils                  0.17.1           py38h06a4308_1  
entrypoints               0.3                      py38_0  
et_xmlfile                1.0.1                   py_1001  
expat                     2.3.0                h2531618_2  
fastcache                 1.1.0            py38h7b6447c_0  
filelock                  3.0.12             pyhd3eb1b0_1  
Flake8                    3.9.0              pyhd3eb1b0_0  
flask                     1.1.2              pyhd3eb1b0_0  
fontconfig                2.13.1               h6c09931_0  
freetype                  2.10.4               h5ab3b9f_0  
fribidi                   1.0.10               h7b6447c_0  
fsspec                    0.9.0              pyhd3eb1b0_0  
future                    0.18.2                   py38_1  
get_terminal_size         1.0.0                haa9412d_0  
gevent                    21.1.2           py38h27cfd23_1  
glib                      2.68.1               h36276a3_0  
glob2                     0.7                pyhd3eb1b0_0  
gmp                       6.2.1                h2531618_2  
gmpy2                     2.0.8            py38hd5f6e3b_3  
graphite2                 1.3.14               h23475e2_0  
greenlet                  1.0.0            py38h2531618_2  
gst-plugins-base          1.14.0               h8213a91_2  
gstreamer                 1.14.0               h28cd5cc_2  
h5py                      2.10.0           py38h7918eee_0  
harfbuzz                  2.8.0                h6f93f22_0  
hdf5                      1.10.4               hb1b8bf9_0  
heapdict                  1.0.1                      py_0  
html5lib                  1.1                        py_0  
icu                       58.2                 he6710b0_3  
idna                      2.10               pyhd3eb1b0_0  
imageio                   2.9.0              pyhd3eb1b0_0  
imagesize                 1.2.0              pyhd3eb1b0_0  
importlib-Metadata        3.10.0           py38h06a4308_0  
importlib_Metadata        3.10.0               hd3eb1b0_0  
iniconfig                 1.1.1              pyhd3eb1b0_0  
intel-openmp              2021.2.0           h06a4308_610  
intervaltree              3.1.0                      py_0  
ipykernel                 5.3.4            py38h5ca1d4c_0  
ipython                   7.22.0           py38hb070fc8_0  
ipython_genutils          0.2.0              pyhd3eb1b0_1  
ipywidgets                7.6.3              pyhd3eb1b0_1  
isort                     5.8.0              pyhd3eb1b0_0  
itsdangerous              1.1.0              pyhd3eb1b0_0  
jbig                      2.1                  hdba287a_0  
jdcal                     1.4.1                      py_0  
jedi                      0.17.2           py38h06a4308_1  
jeepney                   0.6.0              pyhd3eb1b0_0  
jinja2                    2.11.3             pyhd3eb1b0_0  
joblib                    1.0.1              pyhd3eb1b0_0  
jpeg                      9b                   h024ee3a_2  
json5                     0.9.5                      py_0  
jsonschema                3.2.0                      py_2  
jupyter                   1.0.0                    py38_7  
jupyter-packaging         0.7.12             pyhd3eb1b0_0  
jupyter_client            6.1.12             pyhd3eb1b0_0  
jupyter_console           6.4.0              pyhd3eb1b0_0  
jupyter_core              4.7.1            py38h06a4308_0  
jupyter_server            1.4.1            py38h06a4308_0  
jupyterlab                3.0.14             pyhd3eb1b0_1  
jupyterlab_pygments       0.1.2                      py_0  
jupyterlab_server         2.4.0              pyhd3eb1b0_0  
jupyterlab_widgets        1.0.0              pyhd3eb1b0_1  
keyring                   22.3.0           py38h06a4308_0  
kiwisolver                1.3.1            py38h2531618_0  
krb5                      1.18.2               h173b8e3_0  
lazy-object-proxy         1.6.0            py38h27cfd23_0  
lcms2                     2.12                 h3be6417_0  
ld_impl_linux-64          2.33.1               h53a641e_7  
libarchive                3.4.2                h62408e4_0  
libcurl                   7.71.1               h20c2e04_1  
libedit                   3.1.20210216         h27cfd23_1  
libev                     4.33                 h7b6447c_0  
libffi                    3.3                  he6710b0_2  
libgcc-ng                 9.1.0                hdf63c60_0  
libgfortran-ng            7.3.0                hdf63c60_0  
liblief                   0.10.1               he6710b0_0  
libllvm10                 10.0.1               hbcb73fb_5  
libpng                    1.6.37               hbc83047_0  
libsodium                 1.0.18               h7b6447c_0  
libspatialindex           1.9.3                h2531618_0  
libssh2                   1.9.0                h1ba5d50_1  
libstdcxx-ng              9.1.0                hdf63c60_0  
libtiff                   4.2.0                h85742a9_0  
libtool                   2.4.6             h7b6447c_1005  
libuuid                   1.0.3                h1bed415_2  
libuv                     1.40.0               h7b6447c_0  
libwebp-base              1.2.0                h27cfd23_0  
libxcb                    1.14                 h7b6447c_0  
libxml2                   2.9.10               hb55368b_3  
libxslt                   1.1.34               hc22bd24_0  
llvmlite                  0.36.0           py38h612dafd_4  
locket                    0.2.1            py38h06a4308_1  
lxml                      4.6.3            py38h9120a33_0  
lz4-c                     1.9.3                h2531618_0  
lzo                       2.10                 h7b6447c_2  
markupsafe                1.1.1            py38h7b6447c_0  
matplotlib                3.3.4            py38h06a4308_0  
matplotlib-base           3.3.4            py38h62a2d02_0  
mccabe                    0.6.1                    py38_1  
mistune                   0.8.4           py38h7b6447c_1000  
mkl                       2021.2.0           h06a4308_296  
mkl-service               2.3.0            py38h27cfd23_1  
mkl_fft                   1.3.0            py38h42c9631_2  
mkl_random                1.2.1            py38ha9443f7_2  
mock                      4.0.3              pyhd3eb1b0_0  
more-itertools            8.7.0              pyhd3eb1b0_0  
mpc                       1.1.0                h10f8cd9_1  
mpfr                      4.0.2                hb69a4c5_1  
mpmath                    1.2.1            py38h06a4308_0  
msgpack-python            1.0.2            py38hff7bd54_1  
multipledispatch          0.6.0                    py38_0  
mypy_extensions           0.4.3                    py38_0  
navigator-updater         0.2.1                    py38_0  
nbclassic                 0.2.6              pyhd3eb1b0_0  
nbclient                  0.5.3              pyhd3eb1b0_0  
nbconvert                 6.0.7                    py38_0  
nbformat                  5.1.3              pyhd3eb1b0_0  
ncurses                   6.2                  he6710b0_1  
nest-asyncio              1.5.1              pyhd3eb1b0_0  
networkx                  2.5                        py_0  
nltk                      3.6.1              pyhd3eb1b0_0  
nose                      1.3.7           pyhd3eb1b0_1006  
notebook                  6.3.0            py38h06a4308_0  
numba                     0.53.1           py38ha9443f7_0  
numexpr                   2.7.3            py38h22e1b3c_1  
numpy                     1.20.1           py38h93e21f0_0  
numpy-base                1.20.1           py38h7d8b39e_0  
numpydoc                  1.1.0              pyhd3eb1b0_1  
olefile                   0.46                       py_0  
openpyxl                  3.0.7              pyhd3eb1b0_0  
openssl                   1.1.1k               h27cfd23_0  
packaging                 20.9               pyhd3eb1b0_0  
pandas                    1.2.4            py38h2531618_0  
pandoc                    2.12                 h06a4308_0  
pandocfilters             1.4.3            py38h06a4308_1  
pango                     1.45.3               hd140c19_0  
parso                     0.7.0                      py_0  
partd                     1.2.0              pyhd3eb1b0_0  
patchelf                  0.12                 h2531618_1  
path                      15.1.2           py38h06a4308_0  
path.py                   12.5.0                        0  
pathlib2                  2.3.5            py38h06a4308_2  
pathspec                  0.7.0                      py_0  
patsy                     0.5.1                    py38_0  
pcre                      8.44                 he6710b0_0  
pep8                      1.7.1                    py38_0  
pexpect                   4.8.0              pyhd3eb1b0_3  
pickleshare               0.7.5           pyhd3eb1b0_1003  
pillow                    8.2.0            py38he98fc37_0  
pip                       21.0.1           py38h06a4308_0  
pixman                    0.40.0               h7b6447c_0  
pkginfo                   1.7.0            py38h06a4308_0  
pluggy                    0.13.1           py38h06a4308_0  
ply                       3.11                     py38_0  
prometheus_client         0.10.1             pyhd3eb1b0_0  
prompt-toolkit            3.0.17             pyh06a4308_0  
prompt_toolkit            3.0.17               hd3eb1b0_0  
psutil                    5.8.0            py38h27cfd23_1  
ptyprocess                0.7.0              pyhd3eb1b0_2  
py                        1.10.0             pyhd3eb1b0_0  
py-lief                   0.10.1           py38h403a769_0  
pycodestyle               2.6.0              pyhd3eb1b0_0  
pycosat                   0.6.3            py38h7b6447c_1  
pycparser                 2.20                       py_2  
pycurl                    7.43.0.6         py38h1ba5d50_0  
pydocstyle                6.0.0              pyhd3eb1b0_0  
pyerfa                    1.7.3            py38h27cfd23_0  
pyflakes                  2.2.0              pyhd3eb1b0_0  
pygame                    2.0.1                    pypi_0    pypi
pygments                  2.8.1              pyhd3eb1b0_0  
pylint                    2.7.4            py38h06a4308_1  
pyls-black                0.4.6                hd3eb1b0_0  
pyls-spyder               0.3.2              pyhd3eb1b0_0  
pyodbc                    4.0.30           py38he6710b0_0  
pyopenssl                 20.0.1             pyhd3eb1b0_1  
pyparsing                 2.4.7              pyhd3eb1b0_0  
pyqt                      5.9.2            py38h05f1152_4  
pyrsistent                0.17.3           py38h7b6447c_0  
pysocks                   1.7.1            py38h06a4308_0  
pytables                  3.6.1            py38h9fd0a39_0  
pytest                    6.2.3            py38h06a4308_2  
python                    3.8.8                hdb3f193_5  
python-dateutil           2.8.1              pyhd3eb1b0_0  
python-jsonrpc-server     0.4.0                      py_0  
python-language-server    0.36.2             pyhd3eb1b0_0  
python-libarchive-c       2.9                pyhd3eb1b0_1  
pytz                      2021.1             pyhd3eb1b0_0  
pywavelets                1.1.1            py38h7b6447c_2  
pyxdg                     0.27               pyhd3eb1b0_0  
pyyaml                    5.4.1            py38h27cfd23_1  
pyzmq                     20.0.0           py38h2531618_1  
qdarkstyle                2.8.1                      py_0  
qt                        5.9.7                h5867ecd_1  
qtawesome                 1.0.2              pyhd3eb1b0_0  
qtconsole                 5.0.3              pyhd3eb1b0_0  
qtpy                      1.9.0                      py_0  
readline                  8.1                  h27cfd23_0  
regex                     2021.4.4         py38h27cfd23_0  
requests                  2.25.1             pyhd3eb1b0_0  
ripgrep                   12.1.1                        0  
rope                      0.18.0                     py_0  
rtree                     0.9.7            py38h06a4308_1  
ruamel_yaml               0.15.100         py38h27cfd23_0  
scikit-image              0.18.1           py38ha9443f7_0  
scikit-learn              0.24.1           py38ha9443f7_0  
scipy                     1.6.2            py38had2a1c9_1  
seaborn                   0.11.1             pyhd3eb1b0_0  
secretstorage             3.3.1            py38h06a4308_0  
send2trash                1.5.0              pyhd3eb1b0_1  
setuptools                52.0.0           py38h06a4308_0  
simplegeneric             0.8.1                    py38_2  
singledispatch            3.6.1           pyhd3eb1b0_1001  
sip                       4.19.13          py38he6710b0_0  
six                       1.15.0           py38h06a4308_0  
sniffio                   1.2.0            py38h06a4308_1  
snowballstemmer           2.1.0              pyhd3eb1b0_0  
sortedcollections         2.1.0              pyhd3eb1b0_0  
sortedcontainers          2.3.0              pyhd3eb1b0_0  
soupsieve                 2.2.1              pyhd3eb1b0_0  
sphinx                    4.0.1              pyhd3eb1b0_0  
sphinxcontrib             1.0                      py38_1  
sphinxcontrib-applehelp   1.0.2              pyhd3eb1b0_0  
sphinxcontrib-devhelp     1.0.2              pyhd3eb1b0_0  
sphinxcontrib-htmlhelp    1.0.3              pyhd3eb1b0_0  
sphinxcontrib-jsmath      1.0.1              pyhd3eb1b0_0  
sphinxcontrib-qthelp      1.0.3              pyhd3eb1b0_0  
sphinxcontrib-serializinghtml 1.1.4              pyhd3eb1b0_0  
sphinxcontrib-websupport  1.2.4                      py_0  
spyder                    4.2.5            py38h06a4308_0  
spyder-kernels            1.10.2           py38h06a4308_0  
sqlalchemy                1.4.15           py38h27cfd23_0  
sqlite                    3.35.4               hdfb4753_0  
statsmodels               0.12.2           py38h27cfd23_0  
sympy                     1.8              py38h06a4308_0  
tbb                       2020.3               hfd86e86_0  
tblib                     1.7.0                      py_0  
terminado                 0.9.4            py38h06a4308_0  
testpath                  0.4.4              pyhd3eb1b0_0  
textdistance              4.2.1              pyhd3eb1b0_0  
threadpoolctl             2.1.0              pyh5ca1d4c_0  
three-merge               0.1.1              pyhd3eb1b0_0  
tifffile                  2020.10.1        py38hdd07704_2  
tk                        8.6.10               hbc83047_0  
toml                      0.10.2             pyhd3eb1b0_0  
toolz                     0.11.1             pyhd3eb1b0_0  
tornado                   6.1              py38h27cfd23_0  
tqdm                      4.59.0             pyhd3eb1b0_1  
traitlets                 5.0.5              pyhd3eb1b0_0  
typed-ast                 1.4.2            py38h27cfd23_1  
typing_extensions         3.7.4.3            pyha847dfd_0  
ujson                     4.0.2            py38h2531618_0  
unicodecsv                0.14.1                   py38_0  
unixodbc                  2.3.9                h7b6447c_0  
urllib3                   1.26.4             pyhd3eb1b0_0  
watchdog                  1.0.2            py38h06a4308_1  
wcwidth                   0.2.5                      py_0  
webencodings              0.5.1                    py38_1  
werkzeug                  1.0.1              pyhd3eb1b0_0  
wheel                     0.36.2             pyhd3eb1b0_0  
widgetsnbextension        3.5.1                    py38_0  
wrapt                     1.12.1           py38h7b6447c_1  
wurlitzer                 2.1.0            py38h06a4308_0  
wxpython                  4.1.1                    pypi_0    pypi
xlrd                      2.0.1              pyhd3eb1b0_0  
xlsxwriter                1.3.8              pyhd3eb1b0_0  
xlwt                      1.3.0                    py38_0  
xmltodict                 0.12.0                     py_0  
xz                        5.2.5                h7b6447c_0  
yaml                      0.2.5                h7b6447c_0  
yapf                      0.31.0             pyhd3eb1b0_0  
zeromq                    4.3.4                h2531618_0  
zict                      2.0.0              pyhd3eb1b0_0  
zipp                      3.4.1              pyhd3eb1b0_0  
zlib                      1.2.11               h7b6447c_3  
zope                      1.0                      py38_1  
zope.event                4.5.0                    py38_0  
zope.interface            5.3.0            py38h27cfd23_0  
zstd                      1.4.5                h9ceee32_0  

谢谢!

解决方法

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