pymc3、arviz 和 theano 包的稳定版本是什么？

问题描述

我使用的是 Python 3.8.5 版的 Spyder IDE，我使用的是 pymc3（不记得确切的版本），它运行良好，在升级 scipy、spyder 和 python 后，一切都变得混乱了。我花了过去 2 天的时间试图解决这个问题，每次我安装 pymc3 并运行程序时，我都会收到关于 theano 和 cxx__flag 的错误，或者没有 geweke 属性的 arviz 或者然后它会收到关于“plots”的错误'.

谁能告诉我什么是用于 pymc3、arviz、theano 和 theano-pymc 的稳定版本？

编辑 1：

好吧，我设法通过在 spyder IDE 中将 python 升级到 3.8.10 使其正常工作，然后我在 anaconda 终端中使用以下行卸载并重新安装了 pymc3 theano 和 arviz。

conda install -c conda-forge pymc3

但是，现在运行我的代码时出现此错误：

    sd_0 = pm.normal('sd_0',mu=0,sd=1)

  File "D:\Anaconda\lib\site-packages\pymc3\distributions\distribution.py",line 121,in __new__
    dist = cls.dist(*args,**kwargs)

  File "D:\Anaconda\lib\site-packages\pymc3\distributions\distribution.py",line 130,in dist
    dist.__init__(*args,**kwargs)

  File "D:\Anaconda\lib\site-packages\pymc3\distributions\continuous.py",line 488,in __init__
    self.variance = 1.0 / self.tau

  File "D:\Anaconda\lib\site-packages\theano\tensor\var.py",line 176,in __rtruediv__
    return theano.tensor.basic.true_div(other,self)

  File "D:\Anaconda\lib\site-packages\theano\graph\op.py",line 253,in __call__
    compute_test_value(node)

  File "D:\Anaconda\lib\site-packages\theano\graph\op.py",line 126,in compute_test_value
    thunk = node.op.make_thunk(node,storage_map,compute_map,no_recycling=[])

  File "D:\Anaconda\lib\site-packages\theano\graph\op.py",line 634,in make_thunk
    return self.make_c_thunk(node,no_recycling)

  File "D:\Anaconda\lib\site-packages\theano\graph\op.py",line 600,in make_c_thunk
    outputs = cl.make_thunk(

  File "D:\Anaconda\lib\site-packages\theano\link\c\basic.py",line 1203,in make_thunk
    cthunk,module,in_storage,out_storage,error_storage = self.__compile__(

  File "D:\Anaconda\lib\site-packages\theano\link\c\basic.py",line 1138,in __compile__
    thunk,module = self.cthunk_factory(

  File "D:\Anaconda\lib\site-packages\theano\link\c\basic.py",line 1634,in cthunk_factory
    module = get_module_cache().module_from_key(key=key,lnk=self)

  File "D:\Anaconda\lib\site-packages\theano\link\c\cmodule.py",line 1191,in module_from_key
    module = lnk.compile_cmodule(location)

  File "D:\Anaconda\lib\site-packages\theano\link\c\basic.py",line 1543,in compile_cmodule
    module = c_compiler.compile_str(

  File "D:\Anaconda\lib\site-packages\theano\link\c\cmodule.py",line 2546,in compile_str
    raise Exception(

Exception: ("Compilation Failed (return status=1): C:\\Users\\----\\AppData\\Local\\Temp\\ccZOquFy.o: In function `run':\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:99: undefined reference to `__imp__Py_Nonestruct'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:124: undefined reference to `__imp_PyExc_ValueError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:130: undefined reference to `__imp_PyExc_RuntimeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:158: undefined reference to `__imp_PyExc_NotImplementedError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:195: undefined reference to `__imp__Py_Nonestruct'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:210: undefined reference to `__imp_PyExc_ValueError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:479: undefined reference to `__imp_PyExc_NotImplementedError'\r. C:\\Users\\----\\AppData\\Local\\Temp\\ccZOquFy.o: In function `_Py_INCREF':\r. D:/Anaconda/include/object.h:459: undefined reference to `__imp__Py_Nonestruct'\r. C:\\Users\\----\\AppData\\Local\\Temp\\ccZOquFy.o: In function `run':\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:485: undefined reference to `__imp_PyExc_RuntimeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:244: undefined reference to `__imp_PyExc_NotImplementedError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:265: undefined reference to `__imp_PyExc_RuntimeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:173: undefined reference to `__imp_PyExc_TypeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:179: undefined reference to `__imp_PyExc_RuntimeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:515: undefined reference to `__imp__Py_Nonestruct'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:514: undefined reference to `__imp__Py_Nonestruct'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:516: undefined reference to `__imp__Py_Nonestruct'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:259: undefined reference to `__imp_PyExc_TypeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:279: undefined reference to `__imp__Py_Nonestruct'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:294: undefined reference to `__imp_PyExc_ValueError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:328: undefined reference to `__imp_PyExc_NotImplementedError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:349: undefined reference to `__imp_PyExc_RuntimeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:216: undefined reference to `__imp_PyExc_RuntimeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:343: undefined reference to `__imp_PyExc_TypeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:300: undefined reference to `__imp_PyExc_RuntimeError'\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:397: undefined reference to `__imp_PyExc_RuntimeError'\r. C:\\Users\\----\\AppData\\Local\\Temp\\ccZOquFy.o: In function `instantiate':\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:550: undefined reference to `__imp_PyExc_TypeError'\r. C:\\Users\\----\\AppData\\Local\\Temp\\ccZOquFy.o: In function `_import_array':\r. D:/Anaconda/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1480: undefined reference to `__imp_PyCapsule_Type'\r. D:/Anaconda/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1481: undefined reference to `__imp_PyExc_RuntimeError'\r. C:\\Users\\----\\AppData\\Local\\Temp\\ccZOquFy.o: In function `PyInit_m31975b6dadb59d49af3f2b36405378825884299512ee0ed9081be33fa591d30d':\r. C:/Users/----/AppData/Local/Theano/compiledir_Windows-10-10.0.19042-SP0-Intel64_Family_6_Model_78_Stepping_3_GenuineIntel-3.8.10-64/tmpalwsztr6/mod.cpp:583: undefined reference to `__imp_PyExc_ImportError'\r. C:\\Users\\----\\AppData\\Local\\Temp\\ccZOquFy.o: In function `_import_array':\r. D:/Anaconda/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1512: undefined reference to `__imp_PyExc_RuntimeError'\r. D:/Anaconda/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1496: undefined reference to `__imp_PyExc_RuntimeError'\r. D:/Anaconda/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1502: undefined reference to `__imp_PyExc_RuntimeError'\r. D:/Anaconda/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1524: undefined reference to `__imp_PyExc_RuntimeError'\r. D:/Anaconda/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1476: undefined reference to `__imp_PyExc_AttributeError'\r. D:/Anaconda/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1488: undefined reference to `__imp_PyExc_RuntimeError'\r. collect2.exe: error: ld returned 1 exit status\r. ",'FunctionGraph(Elemwise{true_div,no_inplace}(TensorConstant{1.0},TensorConstant{1.0}))')

解决方法

好吧，我所做的是以下几行并设法解决了我的问题：

我卸载并安装了 Anaconda
更新了 conda 和 anaconda
使用 conda install -c conda-forge pymc3 安装 Pymc3，同时保持 numpy、scipy 和 theano 的相同版本（因为我更新 numpy 和 scipy 的那一刻，它往往会导致与 Pymc3 的文件不一致）
我用这一行来安装 theano-pymc conda install -c conda-forge theano-pymc

arviz pymc pymc3 python theano